Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SUPT20H
  • Mouse genes Supt20
  • Rat genes Supt20h
  • Zfish genes supt20
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Supt20

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SUPT20H	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	SUPT20H	IPI	UniProtKB:Q16539	Human	PMID:16751104
Molecular Function	GO:0005515	protein binding	SUPT20H	IPI	UniProtKB:Q16539	Human	PMID:20936779
Molecular Function	GO:0005515	protein binding	SUPT20H	IPI	UniProtKB:Q16539	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	SUPT20H	IPI	UniProtKB:P54253	Human	PMID:32814053
Cellular Component	GO:0070461	SAGA-type complex	SUPT20H	IDA		Human	PMID:18838386
Biological Process	GO:0035521	monoubiquitinated histone deubiquitination	SUPT20H	IDA		Human	PMID:18206972
Biological Process	GO:0035522	monoubiquitinated histone H2A deubiquitination	SUPT20H	IDA		Human	PMID:18206972
Biological Process	GO:0045722	positive regulation of gluconeogenesis	Supt20	IGI	MGI:MGI:95674	Mouse	PMID:24051374
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Supt20	IGI	MGI:MGI:95674	Mouse	PMID:24051374

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern