Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SUMF1
  • Mouse genes Sumf1
  • Rat genes Sumf1
  • Zfish genes sumf1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sumf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:1903135	cupric ion binding	SUMF1	IDA		Human	PMID:25931126
Molecular Function	GO:0120147	formylglycine-generating oxidase activity	SUMF1	IDA		Human	PMID:21224894
Molecular Function	GO:0120147	formylglycine-generating oxidase activity	SUMF1	IDA		Human	PMID:25931126
Molecular Function	GO:0042802	identical protein binding	SUMF1	IPI	UniProtKB:Q8NBK3	Human	PMID:15962010
Molecular Function	GO:0042802	identical protein binding	Sumf1	IPI	PR:Q8R0F3	Mouse	PMID:15962010
Molecular Function	GO:0005515	protein binding	SUMF1	IPI	UniProtKB:P51688	Human	PMID:15962010
Molecular Function	GO:0005515	protein binding	SUMF1	IPI	UniProtKB:Q8NBJ7	Human	PMID:15962010
Molecular Function	GO:0005515	protein binding	Sumf1	IPI	PR:Q8BPG6	Mouse	PMID:15962010
Molecular Function	GO:0005515	protein binding	Sumf1	IPI	MGI:MGI:1350341	Mouse	PMID:15962010
Cellular Component	GO:0005783	endoplasmic reticulum	SUMF1	IDA		Human	PMID:18266766
Cellular Component	GO:0005783	endoplasmic reticulum	SUMF1	IDA		Human	PMID:21224894
Cellular Component	GO:0005783	endoplasmic reticulum	Sumf1	IDA		Mouse	PMID:15962010
Biological Process	GO:1904888	cranial skeletal system development	sumf1	IMP	ZFIN:ZDB-GENO-221104-2	Zfish	PMID:35721514
Biological Process	GO:0030203	glycosaminoglycan metabolic process	sumf1	IMP	ZFIN:ZDB-GENO-221104-2	Zfish	PMID:35721514
Biological Process	GO:0014005	microglia development	sumf1	IMP	ZFIN:ZDB-GENO-221104-2	Zfish	PMID:35721514
Biological Process	GO:0043687	post-translational protein modification	SUMF1	IDA		Human	PMID:21224894
Biological Process	GO:0043687	post-translational protein modification	SUMF1	IDA		Human	PMID:25931126
Biological Process	GO:0018158	protein oxidation	SUMF1	IDA		Human	PMID:21224894
Biological Process	GO:0018158	protein oxidation	SUMF1	IDA		Human	PMID:25931126
Biological Process	GO:0061035	regulation of cartilage development	sumf1	IMP	ZFIN:ZDB-GENO-221104-2	Zfish	PMID:35721514
Biological Process	GO:0046505	sulfolipid metabolic process	sumf1	IMP	ZFIN:ZDB-GENO-221104-1	Zfish	PMID:35721514
Biological Process	GO:0046505	sulfolipid metabolic process	sumf1	IMP	ZFIN:ZDB-GENO-221104-2	Zfish	PMID:35721514

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern