Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STRAP
  • Mouse genes Strap
  • Rat genes Strap
  • Zfish genes strap
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Strap

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003729	mRNA binding	Strap	IDA		Mouse	PMID:33230114
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:Q8WXD5	Human	PMID:15848170
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:Q9H840	Human	PMID:15848170
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:Q9H840	Human	PMID:17178713
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:P15531	Human	PMID:17314099
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:P30039	Human	PMID:17929853
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:P42858	Human	PMID:25959826
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:Q8WXD5	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:Q9H840	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:Q8WXD5	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:Q9H840	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:Q7Z422-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STRAP	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Strap	IPI	UniProtKB:P80204	Mouse	PMID:9856985
Molecular Function	GO:0005515	protein binding	Strap	IPI	UniProtKB:P38438	Mouse	PMID:9856985
Molecular Function	GO:0003723	RNA binding	STRAP	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	STRAP	HDA		Human	PMID:22681889
Molecular Function	GO:0005102	signaling receptor binding	Strap	IDA		Mouse	PMID:9856985
Molecular Function	GO:1990447	U2 snRNP binding	Strap	IDA		Mouse	PMID:33230114
Cellular Component	GO:0005737	cytoplasm	STRAP	IDA		Human	PMID:17929853
Cellular Component	GO:0005829	cytosol	STRAP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	STRAP	IDA		Human	PMID:18984161
Cellular Component	GO:0005829	cytosol	STRAP	IDA		Human	PMID:20513430
Cellular Component	GO:0005634	nucleus	Strap	IDA		Mouse	PMID:33230114
Cellular Component	GO:0032797	SMN complex	STRAP	IPI		Human	PMID:17178713
Cellular Component	GO:0032797	SMN complex	STRAP	IDA		Human	PMID:17178713
Cellular Component	GO:0032797	SMN complex	STRAP	IDA		Human	PMID:18984161
Cellular Component	GO:0034719	SMN-Sm protein complex	STRAP	IDA		Human	PMID:18984161
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	Strap	IMP		Mouse	PMID:33230114
Biological Process	GO:0048856	anatomical structure development	Strap	IMP		Mouse	PMID:33230114
Biological Process	GO:0030277	maintenance of gastrointestinal epithelium	STRAP	IMP		Human	PMID:17929853
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Strap	IDA		Mouse	PMID:9856985
Biological Process	GO:0030512	negative regulation of transforming growth factor beta receptor signaling pathway	STRAP	IMP		Human	PMID:23687415
Biological Process	GO:0030512	negative regulation of transforming growth factor beta receptor signaling pathway	Strap	IDA		Mouse	PMID:9856985
Biological Process	GO:0030182	neuron differentiation	Strap	IMP		Mouse	PMID:33230114
Biological Process	GO:0030182	neuron differentiation	Strap	IMP		Mouse	PMID:29781215
Biological Process	GO:0022618	ribonucleoprotein complex assembly	Strap	IMP		Mouse	PMID:33230114
Biological Process	GO:0000387	spliceosomal snRNP assembly	STRAP	EXP		Human	PMID:12067652
Biological Process	GO:0000387	spliceosomal snRNP assembly	STRAP	IDA		Human	PMID:18984161

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern