Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STRADB
  • Mouse genes Stradb
  • Rat genes Stradb
  • Zfish genes stradb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stradb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	STRADB	IPI	UniProtKB:Q15831	Human	PMID:14676191
Molecular Function	GO:0005515	protein binding	STRADB	IPI	UniProtKB:Q9Y376	Human	PMID:14676191
Molecular Function	GO:0005515	protein binding	STRADB	IPI	UniProtKB:Q15831	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	STRADB	IPI	UniProtKB:Q9Y376	Human	PMID:23414517
Molecular Function	GO:0005515	protein binding	STRADB	IPI	UniProtKB:Q15831	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	STRADB	IPI	UniProtKB:Q9Y376	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	STRADB	IPI	UniProtKB:Q15831	Human	PMID:34591612
Cellular Component	GO:0016235	aggresome	STRADB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005737	cytoplasm	STRADB	IDA		Human	PMID:14517248
Cellular Component	GO:0005829	cytosol	STRADB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	STRADB	IDA		Human	PMID:14517248
Biological Process	GO:0032147	activation of protein kinase activity	STRADB	IDA		Human	PMID:14517248
Biological Process	GO:0000902	cell morphogenesis	Stradb	IDA		Mouse	PMID:12574163
Biological Process	GO:0007254	JNK cascade	Stradb	IDA		Mouse	PMID:12574163
Biological Process	GO:2001240	negative regulation of extrinsic apoptotic signaling pathway in absence of ligand	Stradb	IDA		Mouse	PMID:12574163
Biological Process	GO:0006611	protein export from nucleus	STRADB	IDA		Human	PMID:14517248

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern