Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STRADA
  • Mouse genes Strada
  • Rat genes Strada
  • Zfish genes strada
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Strada

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019900	kinase binding	STRADA	IPI	UniProtKB:Q15831	Human	PMID:19892943
Molecular Function	GO:0005515	protein binding	STRADA	IPI	UniProtKB:Q15831	Human	PMID:12805220
Molecular Function	GO:0005515	protein binding	STRADA	IPI	UniProtKB:Q15831	Human	PMID:14676191
Molecular Function	GO:0005515	protein binding	STRADA	IPI	UniProtKB:Q15831	Human	PMID:19892943
Molecular Function	GO:0005515	protein binding	STRADA	IPI	UniProtKB:Q15831	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	STRADA	IPI	UniProtKB:Q9Y376	Human	PMID:21423148
Molecular Function	GO:0005515	protein binding	STRADA	IPI	UniProtKB:Q15831	Human	PMID:25241761
Molecular Function	GO:0005515	protein binding	STRADA	IPI	UniProtKB:Q15831	Human	PMID:25852190
Molecular Function	GO:0005515	protein binding	STRADA	IPI	UniProtKB:Q15831	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	STRADA	IPI	UniProtKB:Q15831	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	STRADA	IPI	UniProtKB:Q15831	Human	PMID:34591612
Molecular Function	GO:0005515	protein binding	Strada	IPI	PR:Q9Z2W1	Mouse	PMID:21111240
Molecular Function	GO:0030295	protein kinase activator activity	STRADA	IDA		Human	PMID:19892943
Molecular Function	GO:0043539	protein serine/threonine kinase activator activity	STRADA	IDA		Human	PMID:12805220
Molecular Function	GO:0043539	protein serine/threonine kinase activator activity	STRADA	IDA		Human	PMID:19892943
Molecular Function	GO:0004674	protein serine/threonine kinase activity	Strada	IMP		Rat	PMID:14511394|RGD:1600691
Molecular Function	GO:0044877	protein-containing complex binding	Strada	IDA		Rat	PMID:14511394|RGD:1600691
Cellular Component	GO:0005737	cytoplasm	STRADA	IDA		Human	PMID:12805220
Cellular Component	GO:0005737	cytoplasm	STRADA	IDA		Human	PMID:14517248
Cellular Component	GO:0005829	cytosol	STRADA	IDA		Human	GO_REF:0000052
Cellular Component	GO:0140535	intracellular protein-containing complex	STRADA	IDA		Human	PMID:12805220
Cellular Component	GO:0005654	nucleoplasm	STRADA	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	STRADA	IDA		Human	PMID:12805220
Cellular Component	GO:0032991	protein-containing complex	Strada	IDA		Rat	PMID:14511394|RGD:1600691
Cellular Component	GO:1902554	serine/threonine protein kinase complex	STRADA	IPI		Human	PMID:19892943
Biological Process	GO:0032147	activation of protein kinase activity	STRADA	IDA		Human	PMID:12805220
Biological Process	GO:0032147	activation of protein kinase activity	STRADA	IDA		Human	PMID:19892943
Biological Process	GO:0032147	activation of protein kinase activity	Strada	IDA		Mouse	PMID:18854309
Biological Process	GO:0032147	activation of protein kinase activity	Strada	IDA		Rat	PMID:14511394|RGD:1600691
Biological Process	GO:0070314	G1 to G0 transition	STRADA	IPI	UniProtKB:Q15831	Human	PMID:12805220
Biological Process	GO:0006611	protein export from nucleus	STRADA	IDA		Human	PMID:12805220

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern