Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes STK40
  • Mouse genes Stk40
  • Rat genes Stk40
  • Zfish genes stk40
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Stk40

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	STK40	IPI	UniProtKB:P26651	Human	PMID:21784977
Molecular Function	GO:0005515	protein binding	STK40	IPI	UniProtKB:Q96RU8	Human	PMID:25852190
Molecular Function	GO:0005515	protein binding	STK40	IPI	UniProtKB:Q96RU8	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	STK40	IPI	UniProtKB:Q9GZT3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	STK40	IPI	UniProtKB:Q96RU8	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	Stk40	IPI	UniProtKB:Q8BP92	Mouse	MGI:MGI:4420838|PMID:20080709
Molecular Function	GO:0005515	protein binding	Stk40	IPI	PR:Q8BP92	Mouse	PMID:23293024
Cellular Component	GO:0005829	cytosol	STK40	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	STK40	IDA		Human	GO_REF:0000052
Biological Process	GO:0005977	glycogen metabolic process	Stk40	IMP	MGI:MGI:5496282	Mouse	PMID:23293024
Biological Process	GO:0048286	lung alveolus development	Stk40	IMP	MGI:MGI:5496282	Mouse	PMID:23293024
Biological Process	GO:0030324	lung development	Stk40	IMP	MGI:MGI:5496282	Mouse	PMID:23293024
Biological Process	GO:0060425	lung morphogenesis	Stk40	IMP	MGI:MGI:5496282	Mouse	PMID:23293024
Biological Process	GO:0035264	multicellular organism growth	Stk40	IMP	MGI:MGI:5496282	Mouse	PMID:23293024
Biological Process	GO:0043066	negative regulation of apoptotic process	Stk40	IMP	MGI:MGI:5496282	Mouse	PMID:23293024
Biological Process	GO:0010468	regulation of gene expression	Stk40	IMP	MGI:MGI:5496282	Mouse	PMID:23293024
Biological Process	GO:0043408	regulation of MAPK cascade	Stk40	IMP	MGI:MGI:5496282	Mouse	PMID:23293024
Biological Process	GO:0003016	respiratory system process	Stk40	IMP	MGI:MGI:5496282	Mouse	PMID:23293024

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern