Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SPIN1
  • Mouse genes Spin1
  • Rat genes Spin1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Spin1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035064	methylated histone binding	SPIN1	IDA		Human	PMID:21029866
Molecular Function	GO:0035064	methylated histone binding	SPIN1	IDA		Human	PMID:21960006
Molecular Function	GO:0035064	methylated histone binding	SPIN1	IDA		Human	PMID:23077255
Molecular Function	GO:0035064	methylated histone binding	SPIN1	IDA		Human	PMID:24589551
Molecular Function	GO:0035064	methylated histone binding	SPIN1	IDA		Human	PMID:29061846
Molecular Function	GO:0005515	protein binding	SPIN1	IPI	UniProtKB:Q9NQB0	Human	PMID:24589551
Molecular Function	GO:0005515	protein binding	SPIN1	IPI	UniProtKB:P04792	Human	PMID:25277244
Molecular Function	GO:0005515	protein binding	SPIN1	IPI	UniProtKB:Q9BUA3	Human	PMID:29061846
Cellular Component	GO:0005829	cytosol	SPIN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031965	nuclear membrane	SPIN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	SPIN1	IDA		Human	PMID:21960006
Cellular Component	GO:0005654	nucleoplasm	SPIN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SPIN1	IDA		Human	GO_REF:0000054
Cellular Component	GO:0005634	nucleus	SPIN1	IDA		Human	PMID:29061846
Cellular Component	GO:0005819	spindle	Spin1	IDA		Mouse	PMID:9590541
Cellular Component	GO:0005819	spindle	Spin1	IDA		Mouse	PMID:9053325
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	SPIN1	IDA		Human	PMID:29061846
Biological Process	GO:0030177	positive regulation of Wnt signaling pathway	SPIN1	IDA		Human	PMID:24589551
Biological Process	GO:0030177	positive regulation of Wnt signaling pathway	SPIN1	IDA		Human	PMID:29061846
Biological Process	GO:0009303	rRNA transcription	SPIN1	IDA		Human	PMID:21960006

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern