Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNX8
  • Mouse genes Snx8
  • Rat genes Snx8
  • Zfish genes snx8a,snx8b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snx8

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	SNX8	IPI	UniProtKB:Q9Y5X2	Human	PMID:23085988
Molecular Function	GO:0035091	phosphatidylinositol binding	SNX8	IMP		Human	PMID:19782049
Molecular Function	GO:0005515	protein binding	SNX8	IPI	UniProtKB:P16333	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	SNX8	IPI	UniProtKB:Q15041	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX8	IPI	UniProtKB:Q96HR9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX8	IPI	UniProtKB:Q9NWQ9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX8	IPI	UniProtKB:Q9UI14	Human	PMID:32296183
Cellular Component	GO:0031901	early endosome membrane	SNX8	IDA		Human	PMID:19782049
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SNX8	IDA		Human	GO_REF:0000052
Biological Process	GO:0034498	early endosome to Golgi transport	SNX8	IMP		Human	PMID:19782049
Biological Process	GO:0006886	intracellular protein transport	SNX8	IMP		Human	PMID:19782049

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern