Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNX25
  • Mouse genes Snx25
  • Rat genes Snx25
  • Zfish genes snx25
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snx25

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0034713	type I transforming growth factor beta receptor binding	Snx25	IPI	UniProtKB:Q64729	Mouse	MGI:MGI:5545984|PMID:21266196
Cellular Component	GO:0005768	endosome	Snx25	IDA		Mouse	MGI:MGI:5545984|PMID:21266196
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SNX25	IDA		Human	GO_REF:0000052
Biological Process	GO:0060394	negative regulation of pathway-restricted SMAD protein phosphorylation	SNX25	IMP		Human	PMID:21266196
Biological Process	GO:0030512	negative regulation of transforming growth factor beta receptor signaling pathway	SNX25	IMP		Human	PMID:21266196
Biological Process	GO:0030512	negative regulation of transforming growth factor beta receptor signaling pathway	Snx25	IDA		Mouse	MGI:MGI:5545984|PMID:21266196
Biological Process	GO:0032801	receptor catabolic process	SNX25	IMP		Human	PMID:21266196
Biological Process	GO:0032801	receptor catabolic process	Snx25	IDA		Mouse	MGI:MGI:5545984|PMID:21266196

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern