Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNRPA1
  • Mouse genes Snrpa1
  • Rat genes Snrpa1
  • Zfish genes snrpa1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snrpa1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:Q15428	Human	PMID:17332742
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:P08579	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:P09012	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:P09012	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:Q9HCS7	Human	PMID:25599396
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:P08579	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:Q15428	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:Q9HCS7	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:P08579	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:P09012	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:Q13422-7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:Q8N5A5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPA1	IPI	UniProtKB:P08579	Human	PMID:9716128
Molecular Function	GO:0003723	RNA binding	SNRPA1	HDA		Human	PMID:22681889
Cellular Component	GO:0071013	catalytic step 2 spliceosome	SNRPA1	IDA		Human	PMID:11991638
Cellular Component	GO:0016604	nuclear body	SNRPA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	SNRPA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SNRPA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SNRPA1	IDA		Human	PMID:28076346
Cellular Component	GO:0005634	nucleus	SNRPA1	IDA		Human	PMID:28781166
Cellular Component	GO:0005681	spliceosomal complex	SNRPA1	IDA		Human	PMID:9731529
Cellular Component	GO:0071007	U2-type catalytic step 2 spliceosome	SNRPA1	IDA		Human	PMID:28076346
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	SNRPA1	IDA		Human	PMID:28781166
Biological Process	GO:0000398	mRNA splicing, via spliceosome	SNRPA1	IDA		Human	PMID:28076346
Biological Process	GO:0000398	mRNA splicing, via spliceosome	SNRPA1	IDA		Human	PMID:28781166
Biological Process	GO:0007283	spermatogenesis	SNRPA1	IGI	UniProtKB:Q9V4Q8	Human	PMID:27035939

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern