Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNAPC3
  • Mouse genes Snapc3
  • Rat genes Snapc3
  • Zfish genes snapc3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snapc3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q8IYX8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q8IYX8-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q9BPX1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q16533	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q9BPX1	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:O95801	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q05086-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q16533	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q16560-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q6ZNG0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q8NI38	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q9H079	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:I6L9F6	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:O60333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:P04792	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SNAPC3	IPI	UniProtKB:Q9Y3C5	Human	PMID:32814053
Cellular Component	GO:0016604	nuclear body	SNAPC3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	SNAPC3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SNAPC3	IDA		Human	GO_REF:0000052
Biological Process	GO:0006397	mRNA processing	snapc3	IMP	ZFIN:ZDB-GENO-170209-4	Zfish	PMID:27880902
Biological Process	GO:0008380	RNA splicing	snapc3	IMP	ZFIN:ZDB-GENO-170209-4	Zfish	PMID:27880902
Biological Process	GO:0030217	T cell differentiation	snapc3	IMP	ZFIN:ZDB-GENO-170209-4	Zfish	PMID:27880902

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern