Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SMG9
  • Mouse genes Smg9
  • Rat genes Smg9
  • Zfish genes smg9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Smg9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	SMG9	IPI	UniProtKB:Q9H0W8	Human	PMID:20817927
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q8ND04	Human	PMID:19417104
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q96Q15	Human	PMID:19417104
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q8ND04	Human	PMID:20817927
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q14147	Human	PMID:25220460
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:P36406	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q12933	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q15323	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q8ND04	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q14147,UniProtKB:Q8ND04,UniProtKB:Q96Q15	Human	PMID:26841701
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q8ND04,UniProtKB:Q92900,UniProtKB:Q96Q15	Human	PMID:26841701
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:A6NK89	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:O43189	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:O75031	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:O76011	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:P08247	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:P14373	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:P15884-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:P31321	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:P36406	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:P49356	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:P53365	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:P60410	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:P78358	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q04864-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q08379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q0VD86	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q12933	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q15323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q15654	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q2KHT4-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q2TAC2-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q58EX7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q5JR59-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q6DKK2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q6RW13-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q6ZPD8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q86WV8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q8IZR5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q8N720	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q8NI38	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q8TAP6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q969Q6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q96MA6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q99471	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q9BRV3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q9BYT1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q9H0C1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q9UL41	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMG9	IPI	UniProtKB:Q96Q15	Human	PMID:33205750
Biological Process	GO:0007420	brain development	Smg9	IMP		Mouse	MGI:MGI:5775676|PMID:27018474
Biological Process	GO:0001654	eye development	Smg9	IMP		Mouse	MGI:MGI:5775676|PMID:27018474
Biological Process	GO:0007507	heart development	Smg9	IMP		Mouse	MGI:MGI:5775676|PMID:27018474
Biological Process	GO:0001701	in utero embryonic development	Smg9	IMP	MGI:MGI:5692712	Mouse	PMID:27996060
Biological Process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	SMG9	IMP		Human	PMID:19417104

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern