Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Smarce1

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes SMARCE1
- Mouse genes Smarce1
- Rat genes Smarce1
- Zfish genes smarce1
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Smarce1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008080	N-acetyltransferase activity	SMARCE1	IDA		Human	PMID:12192000
Molecular Function	GO:0016922	nuclear receptor binding	SMARCE1	IPI	UniProtKB:P03372	Human	PMID:17363140
Molecular Function	GO:0031492	nucleosomal DNA binding	SMARCE1	HDA		Human	PMID:16217013
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9UKL0	Human	PMID:12192000
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P06536	Human	PMID:12917342
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q68CP9	Human	PMID:15985610
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q8NF64	Human	PMID:16051670
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9HCU9	Human	PMID:16919237
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q15788	Human	PMID:17363140
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q96MT8	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9BVG8	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q68CP9	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:O75558	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P0C7W6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P19012	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P37198	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P40222	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P50222	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P60411	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q01850	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q08379	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q12929	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q15311	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q15323	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q15642	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q5JR59	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q6A162	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q6NUQ1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q8N0S2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q8N6Y0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q8NHQ1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q8TD10	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q8WYH8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q96AA8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q96HT8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q96JN2-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q96L14	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q96MT8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q96R06	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9BVG8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9BYV2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9HCU9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9NPJ6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9UBB9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9UPT5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9Y2J4-4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P0C7W6	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9UBB9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:A1L4K1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:A6NEM1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:A8MQ03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:G5E9W6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:O43482	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:O76011	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:O76014	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P02533	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P08727	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P08779	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P60410	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:P62333	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q01850	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q07627	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q08379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q13099	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q15311	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q15323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q15642-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q4V328	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q5JR59-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q6A162	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q6A163	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q7Z3Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q8N1B4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q8NHQ1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q8TD10	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q8TD31-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q92764	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q96A65-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q96LB3-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q96MT8-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9BXU0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9BYV2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9NRI5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9NTX9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9UBB9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SMARCE1	IPI	UniProtKB:Q9Y2J4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Smarce1	IPI	PR:P97496	Mouse	PMID:16287714
Molecular Function	GO:0005515	protein binding	Smarce1	IPI	PR:A2BH40	Mouse	PMID:16287714
Molecular Function	GO:0005515	protein binding	Smarce1	IPI	PR:000044843	Mouse	PMID:19781646
Molecular Function	GO:0005515	protein binding	Smarce1	IPI	PR:Q3TKT4	Mouse	PMID:16287714
Molecular Function	GO:0005515	protein binding	Smarce1	IPI	PR:Q9Z0H3	Mouse	PMID:16287714
Molecular Function	GO:0005515	protein binding	Smarce1	IPI	RGD:1306678	Rat	PMID:22215678\|RGD:9586361
Molecular Function	GO:0003723	RNA binding	Smarce1	IDA		Mouse	PMID:21936910
Cellular Component	GO:0000785	chromatin	SMARCE1	HDA		Human	PMID:16217013
Cellular Component	GO:0071565	nBAF complex	Smarce1	IDA		Mouse	MGI:MGI:3775125\|PMID:17640523
Cellular Component	GO:0071564	npBAF complex	Smarce1	IDA		Mouse	MGI:MGI:3775125\|PMID:17640523
Cellular Component	GO:0005654	nucleoplasm	SMARCE1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SMARCE1	IDA		Human	GO_REF:0000054
Cellular Component	GO:0005634	nucleus	Smarce1	IDA		Rat	PMID:22215678\|RGD:9586361
Cellular Component	GO:0032991	protein-containing complex	SMARCE1	HDA		Human	PMID:16217013
Cellular Component	GO:0016514	SWI/SNF complex	SMARCE1	IDA		Human	PMID:11078522
Cellular Component	GO:0016514	SWI/SNF complex	SMARCE1	IDA		Human	PMID:8804307
Cellular Component	GO:0016514	SWI/SNF complex	SMARCE1	IDA		Human	PMID:8895581
Cellular Component	GO:0016514	SWI/SNF complex	Smarce1	IDA		Mouse	PMID:16287714
Cellular Component	GO:0070603	SWI/SNF superfamily-type complex	Smarce1	IDA		Mouse	PMID:12368262
Cellular Component	GO:0070603	SWI/SNF superfamily-type complex	Smarce1	IDA		Mouse	PMID:24335282
Biological Process	GO:0007420	brain development	Smarce1	IEP		Rat	PMID:19245665\|RGD:9586355
Biological Process	GO:0006338	chromatin remodeling	SMARCE1	IDA		Human	PMID:11726552
Biological Process	GO:0006338	chromatin remodeling	SMARCE1	HDA		Human	PMID:16217013
Biological Process	GO:0003160	endocardium morphogenesis	smarce1	IMP	ZFIN:ZDB-GENO-190521-2	Zfish	PMID:30337622
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	SMARCE1	IDA		Human	PMID:12192000
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Smarce1	IMP		Rat	PMID:12192000\|RGD:9586356
Biological Process	GO:0022008	neurogenesis	Smarce1	IGI	MGI:MGI:96083	Mouse	PMID:19781646
Biological Process	GO:0006337	nucleosome disassembly	SMARCE1	IDA		Human	PMID:8895581
Biological Process	GO:0007286	spermatid development	Smarce1	IEP		Rat	PMID:22215678\|RGD:9586361

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 05/21/2024 MGI 6.23

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.