Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLN
  • Mouse genes Sln
  • Rat genes Sln
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sln

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SLN	IPI	UniProtKB:Q8N205	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLN	IPI	UniProtKB:Q8N6L0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLN	IPI	UniProtKB:Q9BSE2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLN	IPI	UniProtKB:P16615	Human	PMID:28890335
Molecular Function	GO:0005515	protein binding	SLN	IPI	UniProtKB:Q96GC9	Human	PMID:28890335
Molecular Function	GO:0005515	protein binding	SLN	IPI	UniProtKB:Q9BSE2	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	Sln	IPI	PR:O55143-1	Mouse	PMID:27923914
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Sln	IDA		Mouse	PMID:27923914
Cellular Component	GO:0016529	sarcoplasmic reticulum	SLN	IDA		Human	PMID:9575189
Cellular Component	GO:0033017	sarcoplasmic reticulum membrane	Sln	IDA		Mouse	MGI:MGI:5751610|PMID:26816378
Biological Process	GO:1901895	negative regulation of ATPase-coupled calcium transmembrane transporter activity	SLN	IDA		Human	PMID:28890335
Biological Process	GO:1901895	negative regulation of ATPase-coupled calcium transmembrane transporter activity	Sln	IDA		Mouse	PMID:27923914
Biological Process	GO:1901877	negative regulation of calcium ion binding	Sln	IDA		Mouse	PMID:27923914
Biological Process	GO:0120162	positive regulation of cold-induced thermogenesis	Sln	IMP		Mouse	MGI:MGI:5468397|PMID:22961106
Biological Process	GO:1901894	regulation of ATPase-coupled calcium transmembrane transporter activity	SLN	IDA		Human	PMID:11781085
Biological Process	GO:1901894	regulation of ATPase-coupled calcium transmembrane transporter activity	Sln	IMP		Mouse	MGI:MGI:5295553|PMID:21697544
Biological Process	GO:1901077	regulation of relaxation of muscle	Sln	IMP		Mouse	MGI:MGI:5295553|PMID:21697544
Biological Process	GO:0070296	sarcoplasmic reticulum calcium ion transport	Sln	IMP		Mouse	MGI:MGI:5295553|PMID:21697544

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern