Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLC44A1
  • Mouse genes Slc44a1
  • Rat genes Slc44a1
  • Zfish genes slc44a1a,slc44a1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slc44a1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015220	choline transmembrane transporter activity	SLC44A1	IDA		Human	PMID:16319125
Molecular Function	GO:0015220	choline transmembrane transporter activity	SLC44A1	IMP		Human	PMID:20410607
Molecular Function	GO:0015220	choline transmembrane transporter activity	SLC44A1	IMP		Human	PMID:31855247
Molecular Function	GO:0015220	choline transmembrane transporter activity	Slc44a1	IMP		Mouse	MGI:MGI:6383289|PMID:19519661
Molecular Function	GO:0015220	choline transmembrane transporter activity	Slc44a1	IMP		Rat	PMID:19519661|RGD:15090833
Cellular Component	GO:0005829	cytosol	SLC44A1	IDA		Human	PMID:21185344
Cellular Component	GO:0070062	extracellular exosome	SLC44A1	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	SLC44A1	HDA		Human	PMID:20458337
Cellular Component	GO:0016020	membrane	SLC44A1	HDA		Human	PMID:19946888
Cellular Component	GO:0005739	mitochondrion	SLC44A1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	SLC44A1	IDA		Human	PMID:26746385
Cellular Component	GO:0005654	nucleoplasm	SLC44A1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	SLC44A1	IDA		Human	PMID:16319125
Cellular Component	GO:0005886	plasma membrane	SLC44A1	IDA		Human	PMID:21185344
Cellular Component	GO:0005886	plasma membrane	SLC44A1	IDA		Human	PMID:26746385
Cellular Component	GO:0005886	plasma membrane	SLC44A1	IMP		Human	PMID:31855247
Biological Process	GO:0015871	choline transport	SLC44A1	IDA		Human	PMID:16319125
Biological Process	GO:0015871	choline transport	SLC44A1	IMP		Human	PMID:20410607
Biological Process	GO:0015871	choline transport	Slc44a1	IMP		Mouse	MGI:MGI:6383289|PMID:19519661
Biological Process	GO:0015871	choline transport	Slc44a1	IMP		Rat	PMID:19519661|RGD:15090833
Biological Process	GO:0007605	sensory perception of sound	slc44a1a	IMP	ZFIN:ZDB-MRPHLNO-170601-2	Zfish	PMID:28013291
Biological Process	GO:0007605	sensory perception of sound	slc44a1a	IMP	ZFIN:ZDB-MRPHLNO-170601-1	Zfish	PMID:28013291
Biological Process	GO:0055085	transmembrane transport	SLC44A1	IDA		Human	PMID:16319125
Biological Process	GO:0055085	transmembrane transport	SLC44A1	IMP		Human	PMID:20410607
Biological Process	GO:0055085	transmembrane transport	Slc44a1	IMP		Mouse	MGI:MGI:6383289|PMID:19519661
Biological Process	GO:0055085	transmembrane transport	Slc44a1	IMP		Rat	PMID:19519661|RGD:15090833

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern