Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLC39A5
  • Mouse genes Slc39a5
  • Rat genes Slc39a5
  • Zfish genes slc39a5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slc39a5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0016323	basolateral plasma membrane	Slc39a5	IDA		Mouse	PMID:15358787
Cellular Component	GO:0070062	extracellular exosome	SLC39A5	HDA		Human	PMID:19056867
Biological Process	GO:0001525	angiogenesis	slc39a5	IMP	ZFIN:ZDB-MRPHLNO-210604-1	Zfish	PMID:33081634
Biological Process	GO:0001525	angiogenesis	slc39a5	IMP	ZFIN:ZDB-GENO-211012-4	Zfish	PMID:33081634
Biological Process	GO:0001525	angiogenesis	slc39a5	IMP	ZFIN:ZDB-GENO-211012-3	Zfish	PMID:33081634
Biological Process	GO:0030509	BMP signaling pathway	SLC39A5	IMP		Human	PMID:24891338
Biological Process	GO:0034224	cellular response to zinc ion starvation	Slc39a5	IDA		Mouse	PMID:15358787
Biological Process	GO:0001654	eye development	SLC39A5	IMP		Human	PMID:24891338
Biological Process	GO:0006882	intracellular zinc ion homeostasis	slc39a5	IMP	ZFIN:ZDB-GENO-211012-3	Zfish	PMID:33081634
Biological Process	GO:0006882	intracellular zinc ion homeostasis	slc39a5	IMP	ZFIN:ZDB-MRPHLNO-210604-1	Zfish	PMID:33081634
Biological Process	GO:0006882	intracellular zinc ion homeostasis	slc39a5	IMP	ZFIN:ZDB-GENO-211012-4	Zfish	PMID:33081634
Biological Process	GO:0048026	positive regulation of mRNA splicing, via spliceosome	Slc39a5	IMP		Mouse	PMID:23636947

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern