Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLC39A13
  • Mouse genes Slc39a13
  • Rat genes Slc39a13
  • Zfish genes slc39a13
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slc39a13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SLC39A13	IPI	UniProtKB:P15884	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLC39A13	IPI	UniProtKB:Q04864	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLC39A13	IPI	UniProtKB:O15173	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC39A13	IPI	UniProtKB:P25942	Human	PMID:32296183
Molecular Function	GO:0042803	protein homodimerization activity	SLC39A13	IPI	UniProtKB:Q96H72	Human	PMID:21917916
Molecular Function	GO:0005385	zinc ion transmembrane transporter activity	SLC39A13	IDA		Human	PMID:21917916
Molecular Function	GO:0005385	zinc ion transmembrane transporter activity	SLC39A13	IMP		Human	PMID:23213233
Cellular Component	GO:0030659	cytoplasmic vesicle membrane	SLC39A13	IMP		Human	PMID:23213233
Cellular Component	GO:0005783	endoplasmic reticulum	Slc39a13	IDA		Rat	PMID:25767260|RGD:11553884
Cellular Component	GO:0005789	endoplasmic reticulum membrane	SLC39A13	IDA		Human	PMID:31412620
Cellular Component	GO:0005794	Golgi apparatus	SLC39A13	IDA		Human	PMID:21917916
Cellular Component	GO:0005794	Golgi apparatus	Slc39a13	IDA		Mouse	MGI:MGI:3829328|PMID:18985159
Cellular Component	GO:0000139	Golgi membrane	SLC39A13	IDA		Human	PMID:31412620
Cellular Component	GO:0016020	membrane	SLC39A13	IDA		Human	PMID:21917916
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Slc39a13	IDA		Mouse	MGI:MGI:3829328|PMID:18985159
Biological Process	GO:0050873	brown fat cell differentiation	Slc39a13	IMP		Mouse	MGI:MGI:5913399|PMID:28854265
Biological Process	GO:0061448	connective tissue development	SLC39A13	IMP		Human	PMID:18985159
Biological Process	GO:0061448	connective tissue development	Slc39a13	IMP		Mouse	MGI:MGI:3829328|PMID:18985159
Biological Process	GO:0006882	intracellular zinc ion homeostasis	SLC39A13	IDA		Human	PMID:21917916
Biological Process	GO:0006882	intracellular zinc ion homeostasis	Slc39a13	IMP		Mouse	MGI:MGI:3829328|PMID:18985159
Biological Process	GO:0010043	response to zinc ion	Slc39a13	IEP		Rat	PMID:20859692|RGD:11553849
Biological Process	GO:0071577	zinc ion transmembrane transport	SLC39A13	IDA		Human	PMID:21917916
Biological Process	GO:0071577	zinc ion transmembrane transport	Slc39a13	IMP		Mouse	MGI:MGI:3829328|PMID:18985159
Biological Process	GO:0006829	zinc ion transport	SLC39A13	IMP		Human	PMID:23213233

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern