Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLC35C1
  • Mouse genes Slc35c1
  • Rat genes Slc35c1
  • Zfish genes slc35c1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slc35c1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005457	GDP-fucose transmembrane transporter activity	SLC35C1	IDA		Human	PMID:27738779
Cellular Component	GO:0005794	Golgi apparatus	SLC35C1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000139	Golgi membrane	SLC35C1	IDA		Human	PMID:11326279
Biological Process	GO:0036085	GDP-fucose import into Golgi lumen	SLC35C1	IDA		Human	PMID:11326280
Biological Process	GO:0030259	lipid glycosylation	Slc35c1	IMP	MGI:MGI:3709989	Mouse	PMID:18308723
Biological Process	GO:0045746	negative regulation of Notch signaling pathway	Slc35c1	IMP	MGI:MGI:3709989	Mouse	PMID:20837470

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern