Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLC28A1
  • Mouse genes Slc28a1
  • Rat genes Slc28a1
  • Zfish genes slc28a1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slc28a1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:1901474	azole transmembrane transporter activity	SLC28A1	IDA		Human	PMID:22813716
Molecular Function	GO:0015212	cytidine transmembrane transporter activity	SLC28A1	IDA		Human	PMID:21998139
Molecular Function	GO:0005350	pyrimidine nucleobase transmembrane transporter activity	Slc28a1	IDA		Rat	PMID:8027026|RGD:730006
Molecular Function	GO:0015389	pyrimidine- and adenosine-specific:sodium symporter activity	Slc28a1	IDA		Rat	PMID:10353719|RGD:2317447
Molecular Function	GO:0015213	uridine transmembrane transporter activity	SLC28A1	IDA		Human	PMID:21998139
Molecular Function	GO:0015213	uridine transmembrane transporter activity	SLC28A1	IDA		Human	PMID:22492015
Cellular Component	GO:0016324	apical plasma membrane	Slc28a1	IDA		Rat	PMID:12441131|RGD:2317449
Cellular Component	GO:0031526	brush border membrane	Slc28a1	IDA		Mouse	MGI:MGI:6436961|PMID:22492015
Cellular Component	GO:0005829	cytosol	SLC28A1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	Slc28a1	IDA		Rat	PMID:9480921|RGD:2317448
Cellular Component	GO:0016607	nuclear speck	SLC28A1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	SLC28A1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	SLC28A1	IDA		Human	PMID:21998139
Biological Process	GO:0045117	azole transmembrane transport	SLC28A1	IDA		Human	PMID:22813716
Biological Process	GO:0015861	cytidine transport	SLC28A1	IDA		Human	PMID:21998139
Biological Process	GO:1901642	nucleoside transmembrane transport	SLC28A1	IDA		Human	PMID:22492015
Biological Process	GO:0015855	pyrimidine nucleobase transport	Slc28a1	IDA		Rat	PMID:8027026|RGD:730006
Biological Process	GO:0072531	pyrimidine-containing compound transmembrane transport	SLC28A1	IDA		Human	PMID:22492015
Biological Process	GO:0015862	uridine transport	SLC28A1	IDA		Human	PMID:21998139
Biological Process	GO:0015862	uridine transport	SLC28A1	IDA		Human	PMID:22492015

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern