Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLC18B1
  • Mouse genes Slc18b1
  • Rat genes Slc18b1
  • Zfish genes slc18b1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slc18b1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015311	monoamine:proton antiporter activity	SLC18B1	IDA		Human	PMID:25355561
Molecular Function	GO:0015312	polyamine:proton antiporter activity	SLC18B1	IDA		Human	PMID:25355561
Cellular Component	GO:0030667	secretory granule membrane	Slc18b1	IDA		Mouse	MGI:MGI:5901987|PMID:28082679
Cellular Component	GO:0030672	synaptic vesicle membrane	Slc18b1	IDA		Rat	PMID:25355561|RGD:155230738
Biological Process	GO:0051610	serotonin uptake	SLC18B1	IDA		Human	PMID:25355561
Biological Process	GO:0015848	spermidine transport	SLC18B1	IDA		Human	PMID:25355561
Biological Process	GO:0015848	spermidine transport	Slc18b1	IMP		Mouse	MGI:MGI:5901987|PMID:28082679
Biological Process	GO:0000296	spermine transport	SLC18B1	IDA		Human	PMID:25355561
Biological Process	GO:0000296	spermine transport	Slc18b1	IMP		Mouse	MGI:MGI:5901987|PMID:28082679

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern