Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SGCB
  • Mouse genes Sgcb
  • Rat genes Sgcb
  • Zfish genes sgcb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sgcb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q08AT0	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:O95236-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:P01375	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:P17152	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:P21145	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:P53801	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q01453	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q08426	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q08AM2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q08AT0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q6PL45-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q92982	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q96DZ9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q99735	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q9BXN2-6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q9BZL3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCB	IPI	UniProtKB:Q9NWF4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Sgcb	IPI	PR:P82348	Mouse	PMID:16524571
Molecular Function	GO:0005515	protein binding	Sgcb	IPI	PR:P11531	Mouse	PMID:16524571
Molecular Function	GO:0005515	protein binding	Sgcb	IPI	PR:P82347	Mouse	PMID:16524571
Cellular Component	GO:0016011	dystroglycan complex	Sgcb	IDA		Mouse	PMID:10678176
Cellular Component	GO:0016010	dystrophin-associated glycoprotein complex	SGCB	IDA		Human	PMID:17993586
Cellular Component	GO:0005886	plasma membrane	Sgcb	IDA		Mouse	PMID:16524571
Cellular Component	GO:0005886	plasma membrane	Sgcb	IDA		Mouse	PMID:17164264
Cellular Component	GO:0005886	plasma membrane	Sgcb	IDA		Mouse	PMID:10481911
Cellular Component	GO:0016012	sarcoglycan complex	Sgcb	IDA		Mouse	PMID:19494113
Cellular Component	GO:0016012	sarcoglycan complex	Sgcb	IDA		Mouse	PMID:16524571
Cellular Component	GO:0042383	sarcolemma	Sgcb	IDA		Mouse	PMID:10678176
Cellular Component	GO:0042383	sarcolemma	sgcb	IDA		Zfish	PMID:12659844
Biological Process	GO:0055013	cardiac muscle cell development	Sgcb	IMP	MGI:MGI:2153048	Mouse	PMID:10678176
Biological Process	GO:0010467	gene expression	Sgcb	IMP		Mouse	PMID:19494113
Biological Process	GO:0042593	glucose homeostasis	Sgcb	IMP		Mouse	PMID:19494113
Biological Process	GO:0044381	glucose import in response to insulin stimulus	Sgcb	IMP		Mouse	PMID:19494113
Biological Process	GO:0008152	metabolic process	Sgcb	IMP		Mouse	PMID:19494113
Biological Process	GO:0055001	muscle cell development	Sgcb	IMP	MGI:MGI:2153048	Mouse	PMID:10678176
Biological Process	GO:0009749	response to glucose	Sgcb	IMP		Mouse	PMID:19494113
Biological Process	GO:0097084	vascular associated smooth muscle cell development	Sgcb	IMP	MGI:MGI:2153048	Mouse	PMID:10678176

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern