Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SF3B2
  • Mouse genes Sf3b2
  • Rat genes Sf3b2
  • Zfish genes sf3b2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sf3b2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q15427	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:O15541	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:O43395	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:O60231	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:O95391	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q01081	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q15427	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q6P2Q9	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q70Z53	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q96NB3	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q9HCS7	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q9Y580	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:O60341	Human	PMID:23455924
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q15427	Human	PMID:25737013
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q16637	Human	PMID:25737013
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q6P2P2	Human	PMID:25737013
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q03468	Human	PMID:26030138
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q15427	Human	PMID:27905398
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q9Y580	Human	PMID:27905398
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q9Y580	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q15427	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:P01112	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:P22607	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SF3B2	IPI	UniProtKB:Q9Y649	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Sf3b2	IPI	PR:Q62432	Mouse	PMID:14651998
Molecular Function	GO:0003723	RNA binding	SF3B2	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	SF3B2	HDA		Human	PMID:22681889
Cellular Component	GO:0071013	catalytic step 2 spliceosome	SF3B2	IDA		Human	PMID:11991638
Cellular Component	GO:0016607	nuclear speck	SF3B2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SF3B2	IDA		Human	PMID:27720643
Cellular Component	GO:0005634	nucleus	SF3B2	IDA		Human	PMID:29360106
Cellular Component	GO:0005634	nucleus	Sf3b2	IDA		Rat	PMID:14724321|RGD:10054020
Cellular Component	GO:0005681	spliceosomal complex	SF3B2	IDA		Human	PMID:9731529
Cellular Component	GO:0005689	U12-type spliceosomal complex	SF3B2	IDA		Human	PMID:15146077
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	SF3B2	IDA		Human	PMID:29360106
Cellular Component	GO:0005684	U2-type spliceosomal complex	SF3B2	IPI		Human	PMID:27720643
Biological Process	GO:0000398	mRNA splicing, via spliceosome	SF3B2	IDA		Human	PMID:27720643
Biological Process	GO:0000398	mRNA splicing, via spliceosome	SF3B2	IDA		Human	PMID:29360106

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern