Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SDCCAG8
  • Mouse genes Sdccag8
  • Rat genes Sdccag8
  • Zfish genes cep170aa,sdccag8
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sdccag8

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SDCCAG8	IPI	UniProtKB:O75665	Human	PMID:20835237
Molecular Function	GO:0005515	protein binding	SDCCAG8	IPI	UniProtKB:P04591:PRO_0000038593	Human	PMID:22190034
Molecular Function	GO:0005515	protein binding	SDCCAG8	IPI	UniProtKB:Q3B820	Human	PMID:22940612
Molecular Function	GO:0005515	protein binding	SDCCAG8	IPI	UniProtKB:Q8IUD2	Human	PMID:27224062
Molecular Function	GO:0005515	protein binding	SDCCAG8	IPI	UniProtKB:Q9H5N1	Human	PMID:27224062
Molecular Function	GO:0005515	protein binding	SDCCAG8	IPI	UniProtKB:Q9UPN4	Human	PMID:27224062
Molecular Function	GO:0005515	protein binding	Sdccag8	IPI	PR:Q9R0L6	Mouse	PMID:25088364
Cellular Component	GO:0005911	cell-cell junction	SDCCAG8	IDA		Human	PMID:20835237
Cellular Component	GO:0034451	centriolar satellite	Sdccag8	IDA		Mouse	PMID:25088364
Cellular Component	GO:0005814	centriole	SDCCAG8	IDA		Human	PMID:20835237
Cellular Component	GO:0005814	centriole	Sdccag8	IDA		Mouse	PMID:25088364
Cellular Component	GO:0005813	centrosome	SDCCAG8	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005813	centrosome	SDCCAG8	IDA		Human	PMID:21399614
Cellular Component	GO:0005813	centrosome	Sdccag8	IDA		Mouse	PMID:12559564
Cellular Component	GO:0036064	ciliary basal body	Sdccag8	IDA		Mouse	PMID:29899041
Cellular Component	GO:0005737	cytoplasm	Sdccag8	IDA		Mouse	PMID:25088364
Cellular Component	GO:0097733	photoreceptor cell cilium	Sdccag8	IDA		Mouse	PMID:29899041
Biological Process	GO:0043009	chordate embryonic development	sdccag8	IMP	ZFIN:ZDB-MRPHLNO-101014-7	Zfish	PMID:20835237
Biological Process	GO:0043009	chordate embryonic development	sdccag8	IMP	ZFIN:ZDB-MRPHLNO-101014-6	Zfish	PMID:20835237
Biological Process	GO:0030010	establishment of cell polarity	Sdccag8	IMP		Mouse	MGI:MGI:5285149|PMID:20835237
Biological Process	GO:0031023	microtubule organizing center organization	Sdccag8	IMP		Mouse	PMID:25088364
Biological Process	GO:0001764	neuron migration	Sdccag8	IMP	MGI:MGI:4458830	Mouse	PMID:25088364
Biological Process	GO:1902017	regulation of cilium assembly	SDCCAG8	IMP		Human	PMID:27224062
Biological Process	GO:1902017	regulation of cilium assembly	Sdccag8	IMP		Mouse	MGI:MGI:6094755|PMID:27224062
Biological Process	GO:0035148	tube formation	Sdccag8	IMP		Mouse	MGI:MGI:5285149|PMID:20835237

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern