Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCEL
  • Mouse genes Scel
  • Rat genes Scel
  • Zfish genes scel
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scel

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SCEL	IPI	UniProtKB:Q9H3M7	Human	PMID:14632196
Molecular Function	GO:0005515	protein binding	SCEL	IPI	UniProtKB:Q08379	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	SCEL	IPI	UniProtKB:Q13287	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	SCEL	IPI	UniProtKB:P51116	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCEL	IPI	UniProtKB:Q08379	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCEL	IPI	UniProtKB:Q13287	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCEL	IPI	UniProtKB:Q5JR59	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCEL	IPI	UniProtKB:Q9BVG8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCEL	IPI	UniProtKB:Q9BZW7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCEL	IPI	UniProtKB:P51116	Human	PMID:31515488
Cellular Component	GO:0005737	cytoplasm	SCEL	IDA		Human	PMID:9813070
Cellular Component	GO:0005737	cytoplasm	Scel	IDA		Mouse	PMID:11112355
Cellular Component	GO:0070062	extracellular exosome	SCEL	HDA		Human	PMID:19056867
Cellular Component	GO:0048471	perinuclear region of cytoplasm	SCEL	IDA		Human	PMID:19211270
Biological Process	GO:0009792	embryo development ending in birth or egg hatching	Scel	IDA		Mouse	MGI:MGI:1928154|PMID:11112355
Biological Process	GO:0008544	epidermis development	Scel	IDA		Mouse	MGI:MGI:1928154|PMID:11112355
Biological Process	GO:0030216	keratinocyte differentiation	SCEL	IDA		Human	PMID:14632196
Biological Process	GO:0090263	positive regulation of canonical Wnt signaling pathway	SCEL	IMP		Human	PMID:27013588
Biological Process	GO:0009612	response to mechanical stimulus	SCEL	IEP		Human	PMID:19211270

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern