Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCARA5
  • Mouse genes Scara5
  • Rat genes Scara5
  • Zfish genes scara5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scara5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070287	ferritin receptor activity	Scara5	IDA		Mouse	MGI:MGI:3833042|PMID:19154717
Molecular Function	GO:0005515	protein binding	Scara5	IPI	UniProtKB:P29391	Mouse	MGI:MGI:3833042|PMID:19154717
Cellular Component	GO:0009986	cell surface	Scara5	IDA		Mouse	MGI:MGI:3833042|PMID:19154717
Cellular Component	GO:0005886	plasma membrane	Scara5	IDA		Mouse	MGI:MGI:3833042|PMID:19154717
Biological Process	GO:0034605	cellular response to heat	Scara5	IDA		Mouse	PMID:18755693
Biological Process	GO:0006897	endocytosis	Scara5	IDA		Mouse	MGI:MGI:3833042|PMID:19154717
Biological Process	GO:0006879	intracellular iron ion homeostasis	Scara5	IDA		Mouse	MGI:MGI:3833042|PMID:19154717
Biological Process	GO:0034755	iron ion transmembrane transport	Scara5	IDA		Mouse	MGI:MGI:3833042|PMID:19154717
Biological Process	GO:0070207	protein homotrimerization	Scara5	IPI	UniProtKB:Q8K299	Mouse	MGI:MGI:3663190|PMID:16407294

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern