Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCAI
  • Mouse genes Scai
  • Rat genes Scai
  • Zfish genes scai
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scai

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SCAI	IPI	UniProtKB:P11831	Human	PMID:19350017
Molecular Function	GO:0005515	protein binding	SCAI	IPI	UniProtKB:Q969V6	Human	PMID:19350017
Molecular Function	GO:0005515	protein binding	SCAI	IPI	UniProtKB:O14735	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAI	IPI	UniProtKB:O15294-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAI	IPI	UniProtKB:P27987	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAI	IPI	UniProtKB:Q13526	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAI	IPI	UniProtKB:Q9BT81	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Scai	IPI	UniProtKB:O08808|UniProtKB:Q8K4J6|UniProtKB:Q9JM73	Mouse	MGI:MGI:3850304|PMID:19350017
Molecular Function	GO:0003714	transcription corepressor activity	SCAI	IMP		Human	PMID:19350017
Molecular Function	GO:0003714	transcription corepressor activity	Scai	IDA		Mouse	MGI:MGI:3850304|PMID:19350017
Cellular Component	GO:0005737	cytoplasm	Scai	IDA		Mouse	MGI:MGI:3850304|PMID:19350017
Cellular Component	GO:0031965	nuclear membrane	SCAI	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SCAI	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Scai	IDA		Mouse	MGI:MGI:3850304|PMID:19350017
Biological Process	GO:0030336	negative regulation of cell migration	SCAI	IMP		Human	PMID:19350017
Biological Process	GO:0030336	negative regulation of cell migration	Scai	IGI	UniProtKB:Q8N9R8	Mouse	MGI:MGI:3850304|PMID:19350017
Biological Process	GO:0035024	negative regulation of Rho protein signal transduction	Scai	IDA		Mouse	MGI:MGI:3850304|PMID:19350017

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern