Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SAP30L
  • Mouse genes Sap30l
  • Rat genes Sap30l
  • Zfish genes sap30l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sap30l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	SAP30L	IDA		Human	PMID:19015240
Molecular Function	GO:0042393	histone binding	SAP30L	IDA		Human	PMID:19015240
Molecular Function	GO:0044378	non-sequence-specific DNA binding, bending	SAP30L	IDA		Human	PMID:19015240
Molecular Function	GO:0031491	nucleosome binding	SAP30L	IDA		Human	PMID:19015240
Molecular Function	GO:0010314	phosphatidylinositol-5-phosphate binding	SAP30L	IDA		Human	PMID:19015240
Molecular Function	GO:0005515	protein binding	SAP30L	IPI	UniProtKB:Q6NT76	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SAP30L	IPI	UniProtKB:Q92997	Human	PMID:32296183
Molecular Function	GO:0008270	zinc ion binding	SAP30L	IDA		Human	PMID:19015240
Cellular Component	GO:0001650	fibrillar center	SAP30L	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	SAP30L	IDA		Human	PMID:19015240
Cellular Component	GO:0005654	nucleoplasm	SAP30L	IDA		Human	GO_REF:0000052
Biological Process	GO:0001947	heart looping	sap30l	IMP	ZFIN:ZDB-MRPHLNO-160309-1	Zfish	PMID:22821512
Biological Process	GO:0001947	heart looping	sap30l	IMP	ZFIN:ZDB-MRPHLNO-160309-2	Zfish	PMID:22821512

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern