Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RUFY4
  • Mouse genes Rufy4
  • Rat genes Rufy4
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rufy4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0032266	phosphatidylinositol-3-phosphate binding	RUFY4	IDA		Human	PMID:26416964
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:O14777	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:Q8TBB1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:P51149	Human	PMID:26416964
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:O14777	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:O14777	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:P55273	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:Q9BXW4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:G5E9A7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:P02545	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:P14136	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:P35240	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RUFY4	IPI	UniProtKB:Q86WV8	Human	PMID:32814053
Cellular Component	GO:0005776	autophagosome	RUFY4	IDA		Human	PMID:26416964
Biological Process	GO:0000045	autophagosome assembly	RUFY4	IDA		Human	PMID:26416964
Biological Process	GO:0071353	cellular response to interleukin-4	RUFY4	IDA		Human	PMID:26416964
Biological Process	GO:0071353	cellular response to interleukin-4	Rufy4	IDA		Mouse	MGI:MGI:5702366|PMID:26416964
Biological Process	GO:0016239	positive regulation of macroautophagy	RUFY4	IMP		Human	PMID:26416964

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern