Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RTN4IP1
  • Mouse genes Rtn4ip1
  • Rat genes Rtn4ip1
  • Zfish genes rtn4ip1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rtn4ip1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q15942	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q15942	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:P78358	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q06455-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q12972-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q15942	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q7Z353	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q8TAM6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q96CP1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q9BRP8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q9BS16	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q9BX66-7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q9GZV5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q9H7N4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q9HAU4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q9NP61	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q9NX47	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RTN4IP1	IPI	UniProtKB:Q9UJY4	Human	PMID:32296183
Cellular Component	GO:0005741	mitochondrial outer membrane	RTN4IP1	IDA		Human	PMID:26593267
Cellular Component	GO:0005739	mitochondrion	Rtn4ip1	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Rtn4ip1	HDA		Mouse	PMID:18614015
Biological Process	GO:0042462	eye photoreceptor cell development	rtn4ip1	IMP	ZFIN:ZDB-MRPHLNO-160211-8	Zfish	PMID:26593267
Biological Process	GO:0050773	regulation of dendrite development	Rtn4ip1	IMP		Mouse	MGI:MGI:5787722|PMID:26593267
Biological Process	GO:0010842	retina layer formation	rtn4ip1	IMP		Zfish	PMID:26593267|ZFIN:ZDB-PUB-151125-14
Biological Process	GO:0010842	retina layer formation	rtn4ip1	IMP	ZFIN:ZDB-MRPHLNO-160211-8	Zfish	PMID:26593267

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern