Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RTL1
  • Mouse genes Rtl1
  • Rat genes
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rtl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0030018	Z disc	Rtl1	IDA		Mouse	PMID:32878913
Biological Process	GO:0001525	angiogenesis	Rtl1	IMP	MGI:MGI:3776873	Mouse	PMID:28111885
Biological Process	GO:0001892	embryonic placenta development	Rtl1	IMP		Mouse	PMID:26138477
Biological Process	GO:0001892	embryonic placenta development	Rtl1	IMP	MGI:MGI:3776873	Mouse	PMID:28111885
Biological Process	GO:0010467	gene expression	Rtl1	IMP	MGI:MGI:3776873	Mouse	PMID:32878913
Biological Process	GO:0060711	labyrinthine layer development	Rtl1	IMP		Mouse	PMID:26138477
Biological Process	GO:0060711	labyrinthine layer development	Rtl1	IMP	MGI:MGI:3776873	Mouse	PMID:28111885
Biological Process	GO:0001890	placenta development	Rtl1	IMP	MGI:MGI:3776873	Mouse	PMID:32878913
Biological Process	GO:0001890	placenta development	Rtl1	IDA		Mouse	PMID:32878913
Biological Process	GO:0014841	skeletal muscle satellite cell proliferation	Rtl1	IMP	MGI:MGI:3776873	Mouse	PMID:32878913
Biological Process	GO:0007519	skeletal muscle tissue development	Rtl1	IDA		Mouse	PMID:32878913
Biological Process	GO:0007519	skeletal muscle tissue development	Rtl1	IMP	MGI:MGI:3776873	Mouse	PMID:32878913

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern