Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RRAGD
  • Mouse genes Rragd
  • Rat genes Rragd
  • Zfish genes rragd
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rragd

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019003	GDP binding	RRAGD	IMP		Human	PMID:22424946
Molecular Function	GO:0005525	GTP binding	RRAGD	IMP		Human	PMID:22424946
Molecular Function	GO:0003924	GTPase activity	RRAGD	IMP		Human	PMID:22424946
Molecular Function	GO:0051020	GTPase binding	RRAGD	IPI	UniProtKB:Q5VZM2	Human	PMID:22424946
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q5VZM2	Human	PMID:11073942
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q7L523	Human	PMID:11073942
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q76FK4	Human	PMID:14660641
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q5VZM2	Human	PMID:20381137
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q6IAA8	Human	PMID:20381137
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q5VZM2	Human	PMID:22424946
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q5VZM2,UniProtKB:Q6IAA8	Human	PMID:22424946
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q7L523	Human	PMID:22424946
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q9P2J5	Human	PMID:22424946
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q9P0V3	Human	PMID:22575674
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:P58006	Human	PMID:25259925
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:P58043	Human	PMID:25259925
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q9CYP7	Human	PMID:25259925
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q7L523	Human	PMID:25561175
Molecular Function	GO:0005515	protein binding	RRAGD	IPI	UniProtKB:Q7L523	Human	PMID:28514442
Molecular Function	GO:0046982	protein heterodimerization activity	RRAGD	IPI	UniProtKB:Q7L523	Human	PMID:11073942
Cellular Component	GO:0005813	centrosome	RRAGD	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005737	cytoplasm	RRAGD	IDA		Human	PMID:11073942
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	RRAGD	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005764	lysosome	RRAGD	IDA		Human	PMID:20381137
Cellular Component	GO:0005654	nucleoplasm	RRAGD	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RRAGD	IDA		Human	PMID:11073942
Biological Process	GO:0071233	cellular response to leucine	RRAGD	IMP		Human	PMID:22424946
Biological Process	GO:1990253	cellular response to leucine starvation	RRAGD	IMP		Human	PMID:22424946
Biological Process	GO:1904263	positive regulation of TORC1 signaling	RRAGD	IMP		Human	PMID:22424946

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern