Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPL29
  • Mouse genes Rpl29
  • Rat genes LOC120093247,LOC120095889,Rpl29
  • Zfish genes rpl29
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpl29

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	RPL29	HDA		Human	PMID:25468996
Molecular Function	GO:0008201	heparin binding	Rpl29	IDA		Mouse	PMID:9737974
Molecular Function	GO:0003723	RNA binding	RPL29	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RPL29	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	RPL29	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	RPL29	IDA		Human	PMID:32669547
Molecular Function	GO:0003735	structural constituent of ribosome	Rpl29	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL29	IPI		Human	PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL29	HDA		Human	PMID:12962325
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL29	IDA		Human	PMID:32669547
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl29	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl29	IPI		Mouse	MGI:MGI:6810796|PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl29	IDA		Rat	PMID:7451403|RGD:11036084
Cellular Component	GO:0022626	cytosolic ribosome	RPL29	IDA		Human	PMID:23636399
Cellular Component	GO:0022626	cytosolic ribosome	Rpl29	IDA		Mouse	PMID:17195189
Cellular Component	GO:0016020	membrane	RPL29	HDA		Human	PMID:19946888
Cellular Component	GO:0016020	membrane	Rpl29	IDA		Mouse	PMID:9737974
Cellular Component	GO:0042788	polysomal ribosome	Rpl29	IDA		Mouse	PMID:17195189
Cellular Component	GO:0005840	ribosome	Rpl29	IDA		Rat	PMID:3730400|RGD:11036081
Cellular Component	GO:0045202	synapse	Rpl29	EXP		Mouse	PMID:16452087
Cellular Component	GO:0045202	synapse	Rpl29	IDA		Mouse	PMID:16452087
Biological Process	GO:0007568	aging	Rpl29	IEP		Rat	PMID:21808097|RGD:11038802
Biological Process	GO:0031589	cell-substrate adhesion	Rpl29	IDA		Mouse	PMID:11259264
Biological Process	GO:0048144	fibroblast proliferation	Rpl29	IMP	MGI:MGI:3696667	Mouse	PMID:17195189
Biological Process	GO:0035264	multicellular organism growth	Rpl29	IMP	MGI:MGI:3696667	Mouse	PMID:17195189
Biological Process	GO:0035264	multicellular organism growth	Rpl29	IMP	MGI:MGI:3696668	Mouse	PMID:17195189
Biological Process	GO:0006412	translation	Rpl29	IMP	MGI:MGI:3696667	Mouse	PMID:17195189

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern