Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RP9
  • Mouse genes Rp9
  • Rat genes Rp9
  • Zfish genes rp9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rp9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RP9	IPI	UniProtKB:Q86X95	Human	PMID:15652350
Molecular Function	GO:0005515	protein binding	RP9	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RP9	IPI	UniProtKB:P61328-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RP9	IPI	UniProtKB:Q13895	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RP9	IPI	UniProtKB:Q6ZUT1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RP9	IPI	UniProtKB:Q8N9Q2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RP9	IPI	UniProtKB:Q9BU76	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RP9	IPI	UniProtKB:Q9BXS5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Rp9	IPI	UniProtKB:Q9DA19	Mouse	MGI:MGI:3688359|PMID:15652350
Molecular Function	GO:0005515	protein binding	Rp9	IPI	UniProtKB:Q99PT3|UniProtKB:Q9DA19	Mouse	MGI:MGI:3688359|PMID:15652350
Molecular Function	GO:0003723	RNA binding	RP9	HDA		Human	PMID:22681889
Cellular Component	GO:0005785	signal recognition particle receptor complex	Rp9	IDA		Mouse	MGI:MGI:3688359|PMID:15652350
Biological Process	GO:0050890	cognition	RP9	IMP		Human	PMID:23227193

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern