Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ROGDI
  • Mouse genes Rogdi
  • Rat genes Rogdi
  • Zfish genes rogdi
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rogdi

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ROGDI	IPI	UniProtKB:Q96MT8-3	Human	PMID:32296183
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Rogdi	IDA		Rat	PMID:29150638|RGD:155230779
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Rogdi	IMP		Rat	PMID:29150638|RGD:155230779
Cellular Component	GO:0005635	nuclear envelope	ROGDI	IDA		Human	PMID:22482807
Cellular Component	GO:0098793	presynapse	Rogdi	EXP		Rat	PMID:23622064|RGD:13702180
Cellular Component	GO:0098793	presynapse	Rogdi	IDA		Rat	PMID:23622064|RGD:13702180
Cellular Component	GO:0098793	presynapse	Rogdi	IDA		Rat	PMID:29150638|RGD:155230779
Cellular Component	GO:0098793	presynapse	Rogdi	IMP		Rat	PMID:29150638|RGD:155230779
Biological Process	GO:0007420	brain development	ROGDI	IMP		Human	PMID:25565929
Biological Process	GO:0030097	hemopoiesis	Rogdi	IDA		Mouse	PMID:11740862
Biological Process	GO:0022008	neurogenesis	ROGDI	IMP		Human	PMID:22482807
Biological Process	GO:0042475	odontogenesis of dentin-containing tooth	ROGDI	IMP		Human	PMID:25565929
Biological Process	GO:0008284	positive regulation of cell population proliferation	Rogdi	IDA		Mouse	PMID:11740862

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern