Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RNF187
  • Mouse genes Rnf187
  • Rat genes Rnf187
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rnf187

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RNF187	IPI	UniProtKB:P05412	Human	PMID:20852630
Molecular Function	GO:0005515	protein binding	RNF187	IPI	UniProtKB:Q8TAU3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF187	IPI	UniProtKB:Q9Y2P0	Human	PMID:32296183
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	RNF187	IDA		Human	PMID:20852630
Cellular Component	GO:0005737	cytoplasm	RNF187	IDA		Human	PMID:20852630
Cellular Component	GO:0005829	cytosol	RNF187	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	RNF187	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RNF187	IDA		Human	PMID:20852630
Biological Process	GO:0008284	positive regulation of cell population proliferation	Rnf187	IMP		Mouse	MGI:MGI:5009778|PMID:20852630
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	RNF187	IMP		Human	PMID:20852630
Biological Process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	RNF187	IMP		Human	PMID:20852630
Biological Process	GO:0051865	protein autoubiquitination	RNF187	IDA		Human	PMID:20852630
Biological Process	GO:0070936	protein K48-linked ubiquitination	RNF187	IMP		Human	PMID:20852630

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern