Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RNF138
  • Mouse genes Rnf138rt1
  • Rat genes Rnf138l1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rnf138rt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P61086	Human	PMID:19549727
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P61086	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P13010	Human	PMID:26502055
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P61086	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:O95967	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P61086	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:Q5T7W7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:D3DTS7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:G5E9A7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:O43464	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:O60260-5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:O60333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P01112	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P02545	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P06396	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P07550	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P22607	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P28799	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P35240-4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P37840	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:P61086	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:Q13148	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:Q14957	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:Q16595	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:Q86WV8	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:Q8WXH2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:Q9Y3C5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF138	IPI	UniProtKB:Q9Y649	Human	PMID:32814053
Molecular Function	GO:0019901	protein kinase binding	RNF138	IPI	UniProtKB:Q9UBE8	Human	PMID:16714285
Molecular Function	GO:0003697	single-stranded DNA binding	RNF138	IDA		Human	PMID:26502055
Molecular Function	GO:0061630	ubiquitin protein ligase activity	RNF138	IMP		Human	PMID:26502055
Molecular Function	GO:0061630	ubiquitin protein ligase activity	RNF138	IMP		Human	PMID:26502057
Cellular Component	GO:0005634	nucleus	RNF138	HDA		Human	PMID:21630459
Cellular Component	GO:0035861	site of double-strand break	RNF138	IDA		Human	PMID:26502055
Cellular Component	GO:0035861	site of double-strand break	RNF138	IDA		Human	PMID:26502057
Biological Process	GO:0010792	DNA double-strand break processing involved in repair via single-strand annealing	RNF138	IMP		Human	PMID:26502057
Biological Process	GO:0000724	double-strand break repair via homologous recombination	RNF138	IMP		Human	PMID:26502055
Biological Process	GO:0000724	double-strand break repair via homologous recombination	RNF138	IMP		Human	PMID:26502057
Biological Process	GO:0016567	protein ubiquitination	RNF138	IMP		Human	PMID:26502055
Biological Process	GO:0016567	protein ubiquitination	RNF138	IMP		Human	PMID:26502057

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern