Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBM22
  • Mouse genes Rbm22
  • Rat genes Rbm22
  • Zfish genes rbm22
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbm22

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0048306	calcium-dependent protein binding	RBM22	IPI	UniProtKB:Q9H553	Human	PMID:17045351
Molecular Function	GO:0036002	pre-mRNA binding	RBM22	IDA		Human	PMID:22246180
Molecular Function	GO:0005515	protein binding	RBM22	IPI	UniProtKB:Q53EZ4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM22	IPI	UniProtKB:A8MQ03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM22	IPI	UniProtKB:O75420	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM22	IPI	UniProtKB:Q08379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM22	IPI	UniProtKB:Q53EZ4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM22	IPI	UniProtKB:Q9NSC5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM22	IPI	UniProtKB:Q9NZQ3-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM22	IPI	UniProtKB:Q9Y3C6	Human	PMID:33220177
Molecular Function	GO:0003723	RNA binding	RBM22	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RBM22	HDA		Human	PMID:22681889
Molecular Function	GO:0017070	U6 snRNA binding	RBM22	IDA		Human	PMID:22246180
Cellular Component	GO:0071013	catalytic step 2 spliceosome	RBM22	IDA		Human	PMID:11991638
Cellular Component	GO:0005737	cytoplasm	RBM22	IDA		Human	PMID:21122810
Cellular Component	GO:0005654	nucleoplasm	RBM22	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RBM22	IDA		Human	GO_REF:0000054
Cellular Component	GO:0005634	nucleus	RBM22	IDA		Human	PMID:11278427
Cellular Component	GO:0005634	nucleus	RBM22	IDA		Human	PMID:17045351
Cellular Component	GO:0005634	nucleus	RBM22	IDA		Human	PMID:21122810
Cellular Component	GO:0005634	nucleus	rbm22	IDA		Zfish	PMID:17045351
Cellular Component	GO:0071007	U2-type catalytic step 2 spliceosome	RBM22	IDA		Human	PMID:28076346
Biological Process	GO:0071466	cellular response to xenobiotic stimulus	RBM22	IDA		Human	PMID:21122810
Biological Process	GO:0043009	chordate embryonic development	rbm22	IMP	ZFIN:ZDB-MRPHLNO-091228-1	Zfish	PMID:20013661
Biological Process	GO:0045292	mRNA cis splicing, via spliceosome	RBM22	IDA		Human	PMID:22246180
Biological Process	GO:0046827	positive regulation of protein export from nucleus	RBM22	IDA		Human	PMID:21122810
Biological Process	GO:0042307	positive regulation of protein import into nucleus	RBM22	IDA		Human	PMID:21122810
Biological Process	GO:0033120	positive regulation of RNA splicing	RBM22	IDA		Human	PMID:22246180

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern