Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBFOX3
  • Mouse genes Rbfox3
  • Rat genes Rbfox3
  • Zfish genes rbfox3a,rbfox3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbfox3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Rbfox3	IDA		Mouse	PMID:1483388
Molecular Function	GO:0005515	protein binding	Rbfox3	IPI	UniProtKB:Q16665|UniProtKB:Q61221	Mouse	MGI:MGI:5289736|PMID:21871655
Cellular Component	GO:0005622	intracellular anatomical structure	Rbfox3	IDA		Mouse	PMID:17018287
Cellular Component	GO:0043025	neuronal cell body	Rbfox3	IDA		Mouse	PMID:15964665
Cellular Component	GO:0043025	neuronal cell body	Rbfox3	IDA		Mouse	PMID:20418887
Cellular Component	GO:0043025	neuronal cell body	Rbfox3	IDA		Mouse	PMID:20578039
Cellular Component	GO:0043025	neuronal cell body	Rbfox3	IDA		Mouse	PMID:17606467
Cellular Component	GO:0005634	nucleus	Rbfox3	IDA		Mouse	PMID:1483388
Cellular Component	GO:0005634	nucleus	Rbfox3	IDA		Mouse	PMID:17301088
Cellular Component	GO:0005634	nucleus	Rbfox3	IDA		Mouse	PMID:16314515
Cellular Component	GO:0005634	nucleus	Rbfox3	IDA		Mouse	PMID:25834037
Cellular Component	GO:0005634	nucleus	Rbfox3	IDA		Mouse	PMID:23877069
Cellular Component	GO:0005634	nucleus	Rbfox3	IDA		Mouse	PMID:21172456
Cellular Component	GO:0005634	nucleus	Rbfox3	IDA		Mouse	PMID:23836929
Cellular Component	GO:0005634	nucleus	Rbfox3	IDA		Mouse	PMID:19646951
Cellular Component	GO:0005634	nucleus	Rbfox3	IDA		Mouse	PMID:23447615
Cellular Component	GO:0005634	nucleus	Rbfox3	IDA		Mouse	PMID:24367100
Cellular Component	GO:0005634	nucleus	Rbfox3	IDA		Mouse	PMID:15148382
Cellular Component	GO:0005634	nucleus	rbfox3b	IDA		Zfish	PMID:26952657
Cellular Component	GO:0005634	nucleus	rbfox3a	IDA		Zfish	PMID:26952657
Cellular Component	GO:0043204	perikaryon	Rbfox3	IDA		Mouse	PMID:19646951

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern