Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RANBP1
  • Mouse genes Ranbp1
  • Rat genes Ranbp1
  • Zfish genes ranbp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ranbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	RANBP1	HDA		Human	PMID:25468996
Molecular Function	GO:0005092	GDP-dissociation inhibitor activity	RANBP1	IMP		Human	PMID:7616957
Molecular Function	GO:0005515	protein binding	RANBP1	IPI	UniProtKB:P43487	Human	PMID:16428860
Molecular Function	GO:0005515	protein binding	RANBP1	IPI	UniProtKB:P18754	Human	PMID:7616957
Molecular Function	GO:0005515	protein binding	Ranbp1	IPI	RGD:620367	Rat	PMID:9398662|RGD:9835011
Cellular Component	GO:1904115	axon cytoplasm	Ranbp1	IDA		Rat	PMID:18667152|RGD:9835000
Cellular Component	GO:0005813	centrosome	Ranbp1	IDA		Mouse	PMID:12840069
Cellular Component	GO:0005737	cytoplasm	RANBP1	IDA		Human	PMID:25743254
Cellular Component	GO:0005737	cytoplasm	Ranbp1	IDA		Mouse	PMID:12840069
Cellular Component	GO:0005737	cytoplasm	Ranbp1	IDA		Rat	PMID:10421839|RGD:9834999
Cellular Component	GO:0005829	cytosol	RANBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Ranbp1	IDA		Rat	PMID:10421839|RGD:9834999
Cellular Component	GO:0032838	plasma membrane bounded cell projection cytoplasm	Ranbp1	IDA		Rat	PMID:18667152|RGD:9835000
Biological Process	GO:0072750	cellular response to leptomycin B	Ranbp1	IDA		Rat	PMID:10421839|RGD:9834999
Biological Process	GO:0071466	cellular response to xenobiotic stimulus	Ranbp1	IEP		Rat	PMID:25341891|RGD:9835001
Biological Process	GO:0046604	positive regulation of mitotic centrosome separation	Ranbp1	IDA		Mouse	PMID:12840069
Biological Process	GO:0010976	positive regulation of neuron projection development	Ranbp1	IDA		Rat	PMID:18667152|RGD:9835000
Biological Process	GO:0010976	positive regulation of neuron projection development	Ranbp1	IMP		Rat	PMID:18667152|RGD:9835000
Biological Process	GO:0051592	response to calcium ion	Ranbp1	IEP		Rat	PMID:18667152|RGD:9835000
Biological Process	GO:0007051	spindle organization	Ranbp1	IDA		Mouse	PMID:12840069

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern