Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RABGGTB
  • Mouse genes Rabggtb
  • Rat genes Rabggtb
  • Zfish genes rabggtb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rabggtb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019840	isoprenoid binding	Rabggtb	IDA		Rat	PMID:12620235|RGD:12793022
Molecular Function	GO:0005515	protein binding	RABGGTB	IPI	UniProtKB:P10398	Human	PMID:12620389
Molecular Function	GO:0005515	protein binding	RABGGTB	IPI	UniProtKB:P57081	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RABGGTB	IPI	UniProtKB:Q7Z5A9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RABGGTB	IPI	UniProtKB:Q86YD3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RABGGTB	IPI	UniProtKB:Q9UBV7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RABGGTB	IPI	UniProtKB:Q92696	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RABGGTB	IPI	UniProtKB:P24592	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RABGGTB	IPI	UniProtKB:P57081	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RABGGTB	IPI	UniProtKB:Q92696	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RABGGTB	IPI	UniProtKB:Q9UBV7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Rabggtb	IPI	UniProtKB:Q9CXM0	Mouse	MGI:MGI:5905270|PMID:18161010
Molecular Function	GO:0005515	protein binding	Rabggtb	IPI	UniProtKB:P37727,UniProtKB:Q08602	Rat	PMID:12620235|RGD:12793022
Molecular Function	GO:0004663	Rab geranylgeranyltransferase activity	Rabggtb	IDA		Rat	PMID:18756270|RGD:8554706
Molecular Function	GO:0004663	Rab geranylgeranyltransferase activity	Rabggtb	IDA		Rat	PMID:8505342|RGD:69952
Molecular Function	GO:0031267	small GTPase binding	Rabggtb	IDA		Rat	PMID:18756270|RGD:8554706
Molecular Function	GO:0008270	zinc ion binding	Rabggtb	IDA		Rat	PMID:12620235|RGD:12793022
Molecular Function	GO:0008270	zinc ion binding	Rabggtb	IDA		Rat	PMID:18756270|RGD:8554706
Cellular Component	GO:0005968	Rab-protein geranylgeranyltransferase complex	Rabggtb	IDA		Rat	PMID:12620235|RGD:12793022
Cellular Component	GO:0005968	Rab-protein geranylgeranyltransferase complex	Rabggtb	IDA		Rat	PMID:18756270|RGD:8554706
Biological Process	GO:0018344	protein geranylgeranylation	Rabggtb	IDA		Rat	PMID:18756270|RGD:8554706
Biological Process	GO:0018344	protein geranylgeranylation	Rabggtb	IDA		Rat	PMID:8505342|RGD:69952

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern