Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RABGGTA
  • Mouse genes Rabggta
  • Rat genes Rabggta
  • Zfish genes rabggta
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rabggta

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RABGGTA	IPI	UniProtKB:P24386	Human	PMID:21905166
Molecular Function	GO:0005515	protein binding	RABGGTA	IPI	UniProtKB:P24386	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RABGGTA	IPI	UniProtKB:P53611	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RABGGTA	IPI	UniProtKB:P53611	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Rabggta	IPI	UniProtKB:P37727,UniProtKB:Q08603	Rat	PMID:12620235|RGD:12793022
Molecular Function	GO:0005515	protein binding	Rabggta	IPI	UniProtKB:Q08603	Rat	PMID:12620235|RGD:12793022
Molecular Function	GO:0004663	Rab geranylgeranyltransferase activity	Rabggta	IMP	MGI:MGI:1856886	Mouse	PMID:10737774
Molecular Function	GO:0004663	Rab geranylgeranyltransferase activity	Rabggta	IDA		Rat	PMID:18756270|RGD:8554706
Molecular Function	GO:0004663	Rab geranylgeranyltransferase activity	Rabggta	IDA		Rat	PMID:8505342|RGD:69952
Molecular Function	GO:0031267	small GTPase binding	Rabggta	IDA		Rat	PMID:18756270|RGD:8554706
Molecular Function	GO:0031267	small GTPase binding	Rabggta	IPI	UniProtKB:P09527	Rat	PMID:18756270|RGD:8554706
Cellular Component	GO:0005968	Rab-protein geranylgeranyltransferase complex	Rabggta	IDA		Rat	PMID:12620235|RGD:12793022
Cellular Component	GO:0005968	Rab-protein geranylgeranyltransferase complex	Rabggta	IDA		Rat	PMID:18756270|RGD:8554706
Biological Process	GO:0018344	protein geranylgeranylation	Rabggta	IMP	MGI:MGI:1856886	Mouse	PMID:10737774
Biological Process	GO:0018344	protein geranylgeranylation	Rabggta	IDA		Rat	PMID:18756270|RGD:8554706
Biological Process	GO:0018344	protein geranylgeranylation	Rabggta	IDA		Rat	PMID:8505342|RGD:69952

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern