Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAB43
  • Mouse genes Rab43
  • Rat genes Rab43
  • Zfish genes rab43
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rab43

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003924	GTPase activity	RAB43	IDA		Human	PMID:17562788
Molecular Function	GO:0003924	GTPase activity	RAB43	IDA		Human	PMID:24891604
Molecular Function	GO:0005515	protein binding	RAB43	IPI	UniProtKB:Q92738	Human	PMID:17562788
Molecular Function	GO:0005515	protein binding	RAB43	IPI	UniProtKB:Q15042	Human	PMID:24891604
Molecular Function	GO:0005515	protein binding	RAB43	IPI	UniProtKB:P04792	Human	PMID:25277244
Cellular Component	GO:0070062	extracellular exosome	RAB43	HDA		Human	PMID:19056867
Cellular Component	GO:0005794	Golgi apparatus	RAB43	IDA		Human	PMID:17562788
Cellular Component	GO:0045335	phagocytic vesicle	RAB43	IDA		Human	PMID:21255211
Cellular Component	GO:0045335	phagocytic vesicle	Rab43	IDA		Mouse	PMID:19144319
Biological Process	GO:0071346	cellular response to type II interferon	Rab43	IDA		Mouse	PMID:19144319
Biological Process	GO:0007030	Golgi organization	RAB43	IMP		Human	PMID:17684057
Biological Process	GO:0090382	phagosome maturation	RAB43	IMP		Human	PMID:21255211
Biological Process	GO:0035526	retrograde transport, plasma membrane to Golgi	RAB43	IMP		Human	PMID:17562788
Biological Process	GO:1901998	toxin transport	Rab43	IMP		Mouse	PMID:23716698
Biological Process	GO:0019068	virion assembly	RAB43	IMP		Human	PMID:21680502

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern