Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PUF60
  • Mouse genes Puf60
  • Rat genes Puf60
  • Zfish genes puf60a,puf60b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Puf60

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	PUF60	HDA		Human	PMID:25468996
Molecular Function	GO:0042802	identical protein binding	PUF60	IPI	UniProtKB:Q9UHX1	Human	PMID:16189514
Molecular Function	GO:0042802	identical protein binding	PUF60	IPI	UniProtKB:Q9UHX1	Human	PMID:21516116
Molecular Function	GO:0042802	identical protein binding	PUF60	IPI	UniProtKB:Q9UHX1	Human	PMID:22365833
Molecular Function	GO:0042802	identical protein binding	PUF60	IPI	UniProtKB:Q9UHX1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q96I34	Human	PMID:16169070
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:P26368	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q969J3	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q9UHR5	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q15365	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q9UHR5	Human	PMID:18255255
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:O00555	Human	PMID:21078624
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q8IUQ4	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q9H204	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q9UHR5	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q8IUQ4	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:P26368	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q9UHR5	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:O00560	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:O60844	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:P24863	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:P26368	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:P54727	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q05519	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q2TAL8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q7KZS0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q7Z7F0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q8IUQ4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q969J3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q96BM9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q9H0B3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q9H204	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q9HAU5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q9UHR5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PUF60	IPI	UniProtKB:Q9UHR5	Human	PMID:32814053
Molecular Function	GO:0003723	RNA binding	PUF60	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	PUF60	HDA		Human	PMID:22681889
Cellular Component	GO:0030054	cell junction	PUF60	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	PUF60	IDA		Human	GO_REF:0000052

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern