Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PTRH2
  • Mouse genes Ptrh2
  • Rat genes Ptrh2
  • Zfish genes ptrh2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ptrh2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004045	aminoacyl-tRNA hydrolase activity	PTRH2	IMP		Human	PMID:14660562
Molecular Function	GO:0005515	protein binding	PTRH2	IPI	UniProtKB:Q08117	Human	PMID:15006356
Molecular Function	GO:0005515	protein binding	PTRH2	IPI	UniProtKB:Q05397	Human	PMID:21383007
Molecular Function	GO:0005515	protein binding	PTRH2	IPI	UniProtKB:Q08117	Human	PMID:22952044
Molecular Function	GO:0005515	protein binding	Ptrh2	IPI	UniProtKB:O35346	Rat	PMID:21383007|RGD:8554585
Cellular Component	GO:0005829	cytosol	PTRH2	IMP		Human	PMID:15006356
Cellular Component	GO:0005829	cytosol	PTRH2	IMP		Human	PMID:22952044
Cellular Component	GO:0016020	membrane	PTRH2	HDA		Human	PMID:19946888
Cellular Component	GO:0005739	mitochondrion	PTRH2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	PTRH2	IDA		Human	PMID:15006356
Cellular Component	GO:0005739	mitochondrion	PTRH2	IMP		Human	PMID:22952044
Cellular Component	GO:0005739	mitochondrion	Ptrh2	HDA		Mouse	PMID:18614015
Biological Process	GO:2000811	negative regulation of anoikis	PTRH2	IMP		Human	PMID:21383007
Biological Process	GO:0010629	negative regulation of gene expression	PTRH2	IMP		Human	PMID:15006356
Biological Process	GO:2000210	positive regulation of anoikis	PTRH2	IMP		Human	PMID:15006356
Biological Process	GO:2000210	positive regulation of anoikis	PTRH2	IMP		Human	PMID:22952044

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern