Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PTPRQ
  • Mouse genes Ptprq
  • Rat genes Ptprq
  • Zfish genes ptprq
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ptprq

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0032421	stereocilium bundle	Ptprq	IDA		Mouse	PMID:22357859
Biological Process	GO:0050910	detection of mechanical stimulus involved in sensory perception of sound	Ptprq	IMP	MGI:MGI:2679316	Mouse	PMID:22357859
Biological Process	GO:0002244	hematopoietic progenitor cell differentiation	Ptprq	IMP		Mouse	PMID:24029230
Biological Process	GO:0042472	inner ear morphogenesis	Ptprq	IMP	MGI:MGI:2679316	Mouse	PMID:14534255
Biological Process	GO:0050885	neuromuscular process controlling balance	Ptprq	IMP	MGI:MGI:2679316	Mouse	PMID:22357859
Biological Process	GO:0045598	regulation of fat cell differentiation	PTPRQ	IDA		Human	PMID:19351528
Biological Process	GO:0060116	vestibular receptor cell morphogenesis	Ptprq	IMP	MGI:MGI:2679316	Mouse	PMID:22357859

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern