Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PTGFRN
  • Mouse genes Ptgfrn
  • Rat genes Ptgfrn
  • Zfish genes ptgfrna,ptgfrnb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ptgfrn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PTGFRN	IPI	UniProtKB:P21926	Human	PMID:11278880
Molecular Function	GO:0005515	protein binding	PTGFRN	IPI	UniProtKB:P21926	Human	PMID:23091066
Molecular Function	GO:0005515	protein binding	PTGFRN	IPI	UniProtKB:P21926	Human	PMID:23289620
Molecular Function	GO:0005515	protein binding	PTGFRN	IPI	UniProtKB:P21926	Human	PMID:26686862
Molecular Function	GO:0005515	protein binding	PTGFRN	IPI	UniProtKB:P21926	Human	PMID:30833792
Molecular Function	GO:0005515	protein binding	Ptgfrn	IPI	UniProtKB:P35762	Mouse	MGI:MGI:6282938|PMID:23575678
Molecular Function	GO:0005515	protein binding	Ptgfrn	IPI	UniProtKB:P40241	Rat	PMID:11278880|RGD:8553711
Molecular Function	GO:0005515	protein binding	Ptgfrn	IPI	UniProtKB:Q62745	Rat	PMID:11278880|RGD:8553711
Cellular Component	GO:0009986	cell surface	PTGFRN	HDA		Human	PMID:19581412
Biological Process	GO:0034389	lipid droplet organization	Ptgfrn	IMP		Mouse	PMID:9643346
Biological Process	GO:0014905	myoblast fusion involved in skeletal muscle regeneration	Ptgfrn	IMP		Mouse	MGI:MGI:6282938|PMID:23575678

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern