Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PSMD11
  • Mouse genes Psmd11
  • Rat genes Psmd11
  • Zfish genes psmd11a,psmd11b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Psmd11

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PSMD11	IPI	UniProtKB:Q96LA8	Human	PMID:23455924
Molecular Function	GO:0005515	protein binding	PSMD11	IPI	UniProtKB:O43741	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PSMD11	IPI	UniProtKB:P61201	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Psmd11	IPI	PR:Q80TL4	Mouse	PMID:25242222
Molecular Function	GO:0005515	protein binding	Psmd11	IPI	PR:E9Q9D5	Mouse	PMID:23055941
Cellular Component	GO:0016020	membrane	PSMD11	HDA		Human	PMID:19946888
Cellular Component	GO:0005634	nucleus	PSMD11	HDA		Human	PMID:21630459
Cellular Component	GO:0022624	proteasome accessory complex	PSMD11	IDA		Human	PMID:22972301
Cellular Component	GO:0022624	proteasome accessory complex	Psmd11	IDA		Mouse	MGI:MGI:5442509|PMID:16857966
Cellular Component	GO:0000502	proteasome complex	PSMD11	IDA		Human	PMID:17323924
Cellular Component	GO:0005838	proteasome regulatory particle	Psmd11	IDA		Mouse	PMID:20498273
Biological Process	GO:0043248	proteasome assembly	PSMD11	IMP		Human	PMID:22972301
Biological Process	GO:0048863	stem cell differentiation	PSMD11	IMP		Human	PMID:22972301
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	PSMD11	IMP		Human	PMID:22972301

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern