Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PQBP1
  • Mouse genes Pqbp1
  • Rat genes Pqbp1
  • Zfish genes pqbp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pqbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003690	double-stranded DNA binding	PQBP1	IDA		Human	PMID:26046437
Molecular Function	GO:0051020	GTPase binding	Pqbp1	IPI	RGD:2513	Rat	PMID:23994472|RGD:9685166
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:Q9Y2W2	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:P83876	Human	PMID:19303059
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:P83876	Human	PMID:20307692
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:Q08379	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:Q15691	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:Q9BRK4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:Q9Y2W2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:Q8N884	Human	PMID:26046437
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:Q08379	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:Q9BRK4	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:Q9Y2W2	Human	PMID:27314904
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:Q15691	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PQBP1	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Pqbp1	IPI	RGD:71096	Rat	PMID:23994472|RGD:9685166
Molecular Function	GO:0005515	protein binding	Pqbp1	IPI	RGD:727949	Rat	PMID:23994472|RGD:9685166
Molecular Function	GO:0043021	ribonucleoprotein complex binding	PQBP1	IDA		Human	PMID:23512658
Cellular Component	GO:0005813	centrosome	Pqbp1	IDA		Rat	PMID:23994472|RGD:9685166
Cellular Component	GO:0097546	ciliary base	Pqbp1	IDA		Rat	PMID:23994472|RGD:9685166
Cellular Component	GO:0005929	cilium	Pqbp1	IDA		Rat	PMID:23994472|RGD:9685166
Cellular Component	GO:0005737	cytoplasm	Pqbp1	IDA		Mouse	PMID:21933836
Cellular Component	GO:0010494	cytoplasmic stress granule	Pqbp1	IDA		Mouse	PMID:21933836
Cellular Component	GO:0071598	neuronal ribonucleoprotein granule	Pqbp1	IDA		Mouse	PMID:21933836
Cellular Component	GO:0016607	nuclear speck	PQBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	Pqbp1	IDA		Mouse	PMID:23512658
Cellular Component	GO:0005634	nucleus	Pqbp1	IDA		Mouse	PMID:21933836
Cellular Component	GO:0005634	nucleus	Pqbp1	IDA		Rat	PMID:23994472|RGD:9685166
Biological Process	GO:0002218	activation of innate immune response	PQBP1	IDA		Human	PMID:26046437
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	PQBP1	IMP		Human	PMID:23512658
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	Pqbp1	IMP		Mouse	MGI:MGI:5477858|PMID:23512658
Biological Process	GO:0071360	cellular response to exogenous dsRNA	PQBP1	IDA		Human	PMID:26046437
Biological Process	GO:0051607	defense response to virus	PQBP1	IDA		Human	PMID:26046437
Biological Process	GO:0031175	neuron projection development	Pqbp1	IMP		Mouse	MGI:MGI:5477858|PMID:23512658
Biological Process	GO:0002230	positive regulation of defense response to virus by host	PQBP1	IDA		Human	PMID:26046437
Biological Process	GO:1902857	positive regulation of non-motile cilium assembly	Pqbp1	IMP		Rat	PMID:23994472|RGD:9685166
Biological Process	GO:0032481	positive regulation of type I interferon production	PQBP1	IDA		Human	PMID:26046437
Biological Process	GO:0048814	regulation of dendrite morphogenesis	Pqbp1	IMP		Mouse	PMID:23512658
Biological Process	GO:0043484	regulation of RNA splicing	PQBP1	IMP		Human	PMID:23512658

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern