Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PPP1R42
  • Mouse genes Ppp1r42
  • Rat genes Ppp1r42
  • Zfish genes ppp1r42
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ppp1r42

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003779	actin binding	Ppp1r42	IDA		Mouse	MGI:MGI:5298338|PMID:19886865
Molecular Function	GO:0070840	dynein complex binding	Ppp1r42	IDA		Mouse	MGI:MGI:5298338|PMID:19886865
Molecular Function	GO:0005515	protein binding	Ppp1r42	IPI	UniProtKB:Q9QWT9	Mouse	MGI:MGI:5297782|PMID:18237440
Molecular Function	GO:0005515	protein binding	Ppp1r42	IPI	UniProtKB:P63087	Mouse	MGI:MGI:5086024|PMID:21738792
Molecular Function	GO:0005515	protein binding	Ppp1r42	IPI	UniProtKB:P63087|UniProtKB:Q61768	Mouse	MGI:MGI:5298338|PMID:19886865
Molecular Function	GO:0015631	tubulin binding	Ppp1r42	IDA		Mouse	MGI:MGI:5298338|PMID:19886865
Cellular Component	GO:0005813	centrosome	Ppp1r42	IDA		Mouse	MGI:MGI:5298338|PMID:19886865
Cellular Component	GO:0002177	manchette	Ppp1r42	IDA		Mouse	MGI:MGI:5298338|PMID:19886865
Cellular Component	GO:0002177	manchette	Ppp1r42	IDA		Mouse	MGI:MGI:5297782|PMID:18237440
Cellular Component	GO:0015630	microtubule cytoskeleton	Ppp1r42	IDA		Mouse	MGI:MGI:5298338|PMID:19886865
Cellular Component	GO:0005815	microtubule organizing center	Ppp1r42	IDA		Mouse	MGI:MGI:5298338|PMID:19886865
Biological Process	GO:0010921	regulation of phosphatase activity	Ppp1r42	IDA		Mouse	MGI:MGI:5086024|PMID:21738792

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern