Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes POPDC2
  • Mouse genes Popdc2
  • Rat genes Popdc2
  • Zfish genes popdc2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Popdc2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030552	cAMP binding	Popdc2	IDA		Mouse	PMID:22354168
Cellular Component	GO:0016020	membrane	Popdc2	IDA		Mouse	PMID:10882522
Cellular Component	GO:0042383	sarcolemma	POPDC2	IDA		Human	PMID:26642364
Biological Process	GO:0061337	cardiac conduction	popdc2	IMP	ZFIN:ZDB-MRPHLNO-120322-2	Zfish	PMID:22290329
Biological Process	GO:0001947	heart looping	popdc2	IMP	ZFIN:ZDB-MRPHLNO-120322-2,ZFIN:ZDB-MRPHLNO-120322-3	Zfish	PMID:22290329
Biological Process	GO:0002027	regulation of heart rate	Popdc2	IMP	MGI:MGI:3773727	Mouse	PMID:22354168
Biological Process	GO:0042391	regulation of membrane potential	Popdc2	IGI	MGI:MGI:109366	Mouse	PMID:22354168
Biological Process	GO:0060931	sinoatrial node cell development	Popdc2	IMP	MGI:MGI:3773727	Mouse	PMID:22354168
Biological Process	GO:0051146	striated muscle cell differentiation	popdc2	IMP	ZFIN:ZDB-MRPHLNO-120322-2,ZFIN:ZDB-MRPHLNO-120322-3	Zfish	PMID:22290329
Biological Process	GO:0051146	striated muscle cell differentiation	popdc2	IMP	ZFIN:ZDB-MRPHLNO-120322-2	Zfish	PMID:22290329

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern